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• Pathway interation network digram
  Hello all, I want to draw a metabolism pathway interaction diagram, that represents the genes th...
• Plant genes interaction pathway tool
  Dear Biostars, Is there any software or tools for drawing pathways? Except cytoscape, pathway st...
• How To Get Entire Kegg Or Reactome Pathway Genes As One Interaction Network?
  I am currently extracting sub-networks for my genes of interest using BioGrid network. Instead ...
• Weighted Enrichment Analysis For Gene Networks
  I'm working on Gene Interactions Networks defined using gene expression dataset. I'd like to enri...
• Gene network with expression data
  Hi, I want create gene interaction network like [this][1]. They have done with Ingenuity Pathway...
• Pathway analysis of Protein-Protein interaction network
  I've a gene list of two diseases and i want to create a protein-protein interaction network and f...
• how to draw bipartite graph in cytoscape3
  Hi all, I am trying to draw a network in cytoscape3. There are 1023 interactions in my network a...
• protein-protein interaction network
  Hi, I need to construct a protein-protein interaction network using a large gene list. I have t...
• build a metabolic pathway by list of genes
  hello every one i have some question about gene pathway(network) builder tools . my question is ...
• is it okay to draw PIP interactions using down-regulated genes?,
  Hi, I got RNA seq data from the company. There are more down-regulated genes than up-regulated g...
• Locate Kegg Pathways from my network
  I am working on big networks of genes. I want to locate KEGG/Reactome pathways in my network. I...
• draw signal path automatically
  Hi, I have the next situation, I have a gene signaling pathway (drawn manually) and I have indivi...
• How to extract known pathways from protein protein interaction network?
  Hi, Given physical protein protein interaction like String and KEGG pathway. I would like to kno...
• Protein-Protein interaction in the NFKB pathway tool for multi-entry
  Hi All, I have a list of 2000 genes which I need to relate to the Nfkb pathway, to find if there...
• Well studied gene networks/pathways in rice
  Hello, I need well-studied rice networks/pathways to test networks constructed using my own meth...
• Disease pathway prediction
  HI, I am doing pathway prediction of a disease using multiple tools available like IPA, genemania...
• Protein-protein interaction (PPI)
  Hi all, I would like to draw protein-protein interaction (PPI) network based on my expression da...
• Creating interaction network using cytoscape
  Hi, I have expression data from 65 patient. I am interested in creating protein-protein interact...
• Pathway enrichment and interaction analysis of genes in plants?
  Hey guys, I've previously used KOBAS for pathway enrichment; however, it seems to be down. I'm w...
• Cytoscape: Put The Legend In The Output Figure
  I am using the BiNGO plugin for Cytoscape to draw GO pathway network and find significant enrichm...
• Functional annotation of genes in protein interaction network
  I am making some research on protein interaction network for Colorectal Cancer. Next step after c...
• Gene interaction and network analysis tools
  Hi, I am working on two populations of invasive and non-invasive bacterial samples. I have found...