Nussinov Algorithm That Traces All Possible Rna Secondary Structures

Question

[Angel]

Hi Bostars!

Did anyone know any web server or a tool that implements nussinov algorithm that traces all possible RNA secondary structures with maximum number of base pair?

[Asaf]

All possible structures is exponentially large, you should define a smaller group

Answer 1

[Michael]

http://biowiki.org/view/Teaching/NussinovAlgorithmHomework

However, this algorithm is not very useful for real RNA other than for homework: see discussion Help With Nussinov'S Rna Folding Algorithm