Question: getting the whole of rRNA.fa for ecoli
gravatar for A
4.8 years ago by
A3.7k wrote:

hey guys,

i wanna map my reads on ecoli rRNA sequence by bowtie2...from where i c an download the Ecoli_rRNA.fa please?

i went through this link Download Rrna Sequences already but in NCBI nucleotide i found many hits for ecoli...i just want an

 Ecoli_rRNA.fa  sequence

bowtie2 ribo-seq • 926 views
ADD COMMENTlink modified 3.3 years ago by Biostar ♦♦ 20 • written 4.8 years ago by A3.7k

Also, you do understand that anyone can create a file titled Ecoli_rRNA.fa and put whatever into it. There are 100s to 1000s of E. coli strains. The file name implies ribosomal RNA but you don't even specify if it's the small or large one that you're after. More than likely the small one, but still.. If you put a little thought and context to your questions, you're more likely to receive more thoughtful answers too..

ADD REPLYlink modified 4.8 years ago • written 4.8 years ago by 5heikki8.7k

anyway thank you

ADD REPLYlink written 4.8 years ago by A3.7k
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