Question: Is there any tool to do GO, EC, and KEGG annotation for transcriptome assembly?
gravatar for seta
4.8 years ago by
seta1.3k wrote:

Hi all,

I'm looking for a tool to do functional analysis (GO, EC, and KEGG annotation) of de novo assembled transcriptome generated from a non-model plant. Could you please share what you know about it? Please don't refer me to Trinotate or Annocript.


ADD COMMENTlink written 4.8 years ago by seta1.3k


Gene Set Clustering based on Functional annotation (GeneSCF)

Steps for user defined database and input list:

A: GO enrichment analysis using a Text file with all the genes and GO ids associat



ADD REPLYlink written 4.8 years ago by EagleEye6.6k
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