Question: Ensembl ID gene length GC content
0
gravatar for cwhitfield
4.5 years ago by
cwhitfield0
United States
cwhitfield0 wrote:

Hi - Is there a way to get a list of ensembl ID, gene length (transcript length) and GC content.

Thanks

rna-seq ensembl • 2.6k views
ADD COMMENTlink modified 14 months ago by Biostar ♦♦ 20 • written 4.5 years ago by cwhitfield0

Thank you, This is great!

ADD REPLYlink written 4.5 years ago by cwhitfield0
1
gravatar for Devon Ryan
4.5 years ago by
Devon Ryan94k
Freiburg, Germany
Devon Ryan94k wrote:

I wrote some code in R to do that a while back. You're free to just modify it to fit your needs.

ADD COMMENTlink written 4.5 years ago by Devon Ryan94k
4

Alternatively, BioMart gives you GC content and transcript length. 

ADD REPLYlink modified 4.5 years ago • written 4.5 years ago by Ashutosh Pandey12k
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