Hello,
I would like to compare the correlation between the gene expression pattern of mouse and human tumor type. We have generated a mouse tumor model (squamous cell carinoma) and have performed RNA sequencing (single end, ffpe) on few tumor samples. There are no biological replicates and controls. We only have mouse tumor samples sequenced. I would like to see if our mouse tumor model show more correlation towards human squamous cell carinoma when compared to other human tumor model. Human Rnaseq data (raw read counts) is available in TCGA database.