Question: Motif coordinates and cell line secences
0
gravatar for Azhar
4.3 years ago by
Azhar40
China
Azhar40 wrote:

Hay,

           I have two questions,

1. i got motifs form a peak file using linux desktop based software, but motifs do not have coordinates, is there any software can give me coordinates with respective Motifs.

2. I want to use HEK293 cell lines for aging conditions. is there any method or protocol for cell line aging and using any TF for chip-seq

 

Regards

myposts • 1.1k views
ADD COMMENTlink modified 4.3 years ago by Alex Reynolds29k • written 4.3 years ago by Azhar40
0
gravatar for Alex Reynolds
4.3 years ago by
Alex Reynolds29k
Seattle, WA USA
Alex Reynolds29k wrote:

You can use FIMO in the MEME suite to search a genome for the motifs you provide.

ADD COMMENTlink written 4.3 years ago by Alex Reynolds29k
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