Hi
I'm looking for a tool to detect SNPs between DNA sequences.
For example, when I enter input sequences
seq1 = GATC
seq2 = GTTC
The result should contain the base position (2nd base in this case) and will be better if mutated bases also appears (A/T).
I've been looking for a software, but no luck yet.
Someone might say I can just code for it, but my coding skill doesn't reach the level.
Beside, I'm sure somebody already made one.
So if anyone knows it, please let me know.
Thank you!
Thank you, Pierre!
I really wanted to try the tool you made, but I don't really understand how to compile it.
I followed the instruction on the jvarkit page. No success yet.
Would you please explain the compilation process?
please tell me what's going wrong.
There is another tool on Pierre's Github which may suit your needs, found it on this thread.