4.4 years ago by
iraun • 3.7k
iraun • 3.7k wrote:
If I've understood correctly your question, I'd suggest you the following workflow:
- Take the positions of those unannotated SNP.
Create a bed file with:
SNP_chromosome SNP_position-10000 SNP_position+10000
- Create gene
.bed|.gtf|.gff3file with gene coordinates.
- Intersect (
bedtools intersect) these two files.
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