Question: perl scriot for fasta
0
gravatar for priya.batra03
4.3 years ago by
priya.batra030 wrote:

i have 744 sequence and i have to use software algpred suggest some perl script that can be helpful to read multiple fasta sequence

 

sequence • 1.1k views
ADD COMMENTlink modified 4.3 years ago by venu6.6k • written 4.3 years ago by priya.batra030

And your question is...

ADD REPLYlink written 4.3 years ago by Benn8.0k

Sounds like you want a shell script.

ADD REPLYlink written 4.3 years ago by genomax83k
0
gravatar for venu
4.3 years ago by
venu6.6k
Germany
venu6.6k wrote:

Bio::DB::Fasta - Bioperl module to read multiple fasta sequences.

ADD COMMENTlink written 4.3 years ago by venu6.6k

Here is a link to the beginners HOWTO on the Bioperl wiki. It gives you an introduction to the sequence and seqIO objects. If you learn these you can do pretty much anything in terms of basic fasta parsing/manipulation

http://www.bioperl.org/wiki/HOWTO:Beginners

ADD REPLYlink written 4.3 years ago by memory_donk290
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