Width setting in r
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7.8 years ago
ashamscsoft ▴ 20

Anyone please help me. I want to increase the width of workspace in R. When i give the whole gene while running it says reached maximum and omitted 36247 entries. Kindly anyone help.

sequence • 1.1k views
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7.8 years ago
options(max.print=1000000) # or some other number

Of course I'm not sure why you want to print so many lines to the screen...

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because the sequence is upto 464kb

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And you want that printed to the screen? Are you really planning on scrolling through that? Just because it isn't printed to screen doesn't mean you're not storing it.

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yes of course. I know it will get stored but we want to see the result rite. While seeing the stored results, it s coming with above said error so only.

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I think you may be better off writing the data to a temporary file and using a dedicated text editor to view it.

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I need to split the sequence to codon for that atleast i need to do it anyway. It cannot be done manually.

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Get your codon logic working for a subset of your sequence, and then implement it on the larger sequence. The algorithm, like any other algorithm at this level, should be independent of the data size difference - we are not dealing with even megabytes of data, after all.

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