Question: How to install gdc-client in Ubnutu
1
gravatar for pxf109
2.7 years ago by
pxf10910
pxf10910 wrote:

The instruction from the website, it is too confuse for me. I really hope someone can help me. Thank you.

software error • 3.6k views
ADD COMMENTlink modified 2.7 years ago by Vanish00710 • written 2.7 years ago by pxf10910

There is no way we can help without knowing what website you are referring to and what the error is.

ADD REPLYlink written 2.7 years ago by SES8.2k

The point of this comment was to encourage OP to provide a minimum of details so we are not reduced to doing web searches for people. Obviously we can all do that, but the idea is to help with the issue and knowing what that is will save everyone a lot of time. It will also focus the answers and promote higher quality discussions.

ADD REPLYlink written 2.7 years ago by SES8.2k
5
gravatar for genomax
2.7 years ago by
genomax65k
United States
genomax65k wrote:

Following should be all you need

wget https://gdc.nci.nih.gov/files/public/file/gdc-client_v1.0.1_Ubuntu14.04_x64.zip
unzip gdc-client_v1.0.1_Ubuntu14.04_x64.zip
./gdc-client (to verify that program works)

Next step is optional. You could copy the client to a directory in your $PATH or to the location below (if it exists on your computer)

cp -pi ./gdc-client /usr/local/bin (if this does not work)
sudo cp -pi ./gdc-client /usr/local/bin
ADD COMMENTlink modified 2.7 years ago • written 2.7 years ago by genomax65k
0
gravatar for mbk0asis
2.7 years ago by
mbk0asis410
Korea, Republic Of
mbk0asis410 wrote:

Check this site!

https://gdc.nci.nih.gov/access-data/gdc-data-transfer-tool

ADD COMMENTlink written 2.7 years ago by mbk0asis410
0
gravatar for neelablore
2.7 years ago by
neelablore0
neelablore0 wrote:

Check this link

Installgdc

ADD COMMENTlink written 2.7 years ago by neelablore0
0
gravatar for Vanish007
2.7 years ago by
Vanish00710
USA
Vanish00710 wrote:

Genomax2 gave a good answer

I don't quite know where your error is, but check and make sure you are also in the correct operating system. If you are not in fact using Ubuntu and have Linux, you might have to build the client from the source code (download the source code from the GitHub website: https://github.com/NCI-GDC/gdc-client) and then build with Python.

ADD COMMENTlink written 2.7 years ago by Vanish00710
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