Software for visualising GWAS results
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5.0 years ago

Does anyone know a good GWAS visualisation package that can be integrated into a website? I've seen a website using this one: enter image description here

Which looks brilliant. Does anyone know if that is a downloadable package? I'm looking for a package preferably in javascript. I've seen jbrowse but the graphs aren't that nice looking.

gwas code software package • 1.8k views
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If you don't mind a bit of coding, using R Shiny this should be pretty easy.

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4.8 years ago
cmdcolin ★ 1.7k

Have you seen the gwasviewer plugin for jbrowse? https://github.com/elsiklab/gwasviewer enter image description here

It doesn't by default view all chromosomes at a time but I made a demo of that here for example in this gist

Disclaimer: developed by me

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3.7 years ago

@entheologist33, The GWAS visualization may comes from ZBrowse. Check out the following links.

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