Question: Software for visualising GWAS results
4
gravatar for entheologist33
2.9 years ago by
entheologist3380 wrote:

Does anyone know a good GWAS visualisation package that can be integrated into a website? I've seen a website using this one: enter image description here

Which looks brilliant. Does anyone know if that is a downloadable package? I'm looking for a package preferably in javascript. I've seen jbrowse but the graphs aren't that nice looking.

package code gwas software • 1.2k views
ADD COMMENTlink modified 19 months ago by shuaichengwang0 • written 2.9 years ago by entheologist3380

If you don't mind a bit of coding, using R Shiny this should be pretty easy.

ADD REPLYlink written 2.7 years ago by zx87548.2k
1
gravatar for cmdcolin
2.7 years ago by
cmdcolin1.2k
United States
cmdcolin1.2k wrote:

Have you seen the gwasviewer plugin for jbrowse? https://github.com/elsiklab/gwasviewer enter image description here

It doesn't by default view all chromosomes at a time but I made a demo of that here for example in this gist

Disclaimer: developed by me

ADD COMMENTlink modified 2.6 years ago • written 2.7 years ago by cmdcolin1.2k
0
gravatar for shuaichengwang
19 months ago by
shuaichengwang0 wrote:

@entheologist33, The GWAS visualization may comes from ZBrowse. Check out the following links.

ADD COMMENTlink written 19 months ago by shuaichengwang0
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