Can I improve my de novo assembly with a reference genome?
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4.0 years ago
cristian ▴ 260

Hi,

I have created a de novo assembly of a strain of C. elegans using pacbio. I have got 143 contigs in the assembly. Do you know if there is any software out there that I can use to scaffold the contigs together using the available reference genome of C. elegans?

Thanks.

C.

de novo assembly pacbio genome reference • 1.5k views
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