Entering edit mode
7.3 years ago
sacha
★
2.4k
i get the following output from vcf-compare by comparing two VCF :
VN 2172 NA12878/intersect2.vcf.gz (6.8%)
VN 29648 Coriell.varscan.snp.vcf.gz (20.7%) NA12878/intersect2.vcf.gz (93.2%)
VN 113680 Coriell.varscan.snp.vcf.gz (79.3%)
I would like to plot a Venn diagram quickly. Any idea ? Online tool ? R tool ? command line tool ?
The
gplots
lib in R contains avenn()
function.I guess you could easily write an Rscript using the VennDiagram package for this purpose.
yes... but I m lazzy :D !
Then try venny
Same. Googling "online venn diagram" also brings up some hits :)
several resources : http://research.stowers.org/mcm/venn.html