uploading wig file on the UCSC

Question

[alirezamomeni707]

I have RNAseq data and have made wig file to upload on UCSC. as you know the file size must be at most 500 MB. I can not upload to the UCSC. do you have any solution? BTW, I made the .wig files using HTSeq in python.

[Santosh Anand]

see https://genome.ucsc.edu/goldenpath/help/wiggle.html

Answer 1

[GenoMax]

If using a web server to host your files is not an available option then look into GBiB, a virtual machine version of UCSC browser designed to be run locally.

Answer 2

[Istvan Albert]

The best approach is to use bigWig files hosted on a separate webserver.

In addition look into creating TrackHubs

https://genome.ucsc.edu/goldenpath/help/hgTrackHubHelp.html