Question: COSMIC-like database for mouse sequencing data
0
gravatar for apuhegde
23 months ago by
apuhegde20
United States
apuhegde20 wrote:

I have DNA sequencing data on murine samples, which I want to run through a database like COSMIC to annotate cancer-relevant mutations. I see this question has already been asked here:

http://seqanswers.com/forums/showthread.php?t=70729&utm_source=feedburner&utm_medium=feed&utm_campaign=Feed%3A+seqanswers-all+(SEQanswers+-+All+Forum+Threads)&do=bbcode

However, I don't see any definitive solutions to this problem. The genomic co-ordinates liftover solution seems pretty straightforward compared to the approach used by the publication linked in the post, however the latter seems more accurate. What would be the best way to go about doing this?

ADD COMMENTlink modified 23 months ago by EagleEye6.4k • written 23 months ago by apuhegde20
0
gravatar for EagleEye
23 months ago by
EagleEye6.4k
Sweden
EagleEye6.4k wrote:

Hi did you have a look at this database, http://www.informatics.jax.org/allsearch.shtml ?

ADD COMMENTlink modified 23 months ago • written 23 months ago by EagleEye6.4k
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