Question: If you only have diploid reference genome, how can you properly assemble a haploid genome?
2.1 years ago by
Hranjeev • 1.5k
Hranjeev • 1.5k wrote:
Can I not assemble a haploid genome using a diploid as a reference. Should I or should I not?
Is it acceptable to perform mapping based assembly of a haploid using the diploid as reference? Instead, do you start assembling using a de novo strategy?
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