Hi,
Do you have any recommendation for a hybrid assembly of a 1.5G diploid genome using Illumina and Pacbio reads ?
I have different insert size libraries with Illumina (paired end and mate pair).
I ve seen this page
but last update was in 2016 so I am not sure whether it is up to date anymore.
Thanks for your help.
What sequencing coverage do you have for the PacBio reads? Are they from the RSII or Sequel? What sequencing coverage do you have for the Illumina paired end reads? What are the insert sizes for the mate pair libraries?
Thanks for your answer jean.
PacBio data: Sequel and coverage 20X
Illumina data: Total coverage 50X and Insert size: 350, 550, 700 for PE and 3000, 5000 for MP.