I would like to plot a bed file with numeric values ( = bedgraph). My input data are : chr pos start end value ( value between -1 and 1)
chr19 50906809 50907015 0.8173737057494912 chr19 50909381 50909562 0.2639404477044525 chr19 50909499 50909702 0.5421707627971464 chr19 50909697 50909863 0.7663584319162735
I would like something like this :
Do you have an easy way ? R package or matplotlib solution ?
Maybe something interesting in : https://bernatgel.github.io/karyoploter_tutorial/
Haven't tried, maybe something in https://github.com/deeptools/pyGenomeTracks
Python !! This is awesome ! Thanks !
pyGenomeTracks can't plot multiple chromosomes at once