Error installing ligro (a tool for molecular dynamics)
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6.1 years ago
priyas772 • 0

Hello! I am trying to install LiGRO- Protein-ligand molecular dynamics (uses python 2.7) in ubuntu, i keep getting this error at the end.

mv: cannot stat '/root/ligro_temp/amber16': No such file or directory
<type 'exceptions.OSError'> Exception in Tk callback
  Function: <function install_all at 0x7ff8406417d0> (type: <type 'function'>)
  Args: ()
Traceback (innermost last):
  File "/usr/local/lib/python2.7/dist-packages/Pmw/Pmw_1_3_3/lib/PmwBase.py", line 1753, in __call__
    return apply(self.func, args)
  File "./LiGRO_Install.py", line 264, in install_all
    install_ambertools()
  File "./LiGRO_Install.py", line 171, in install_ambertools
    os.chdir(path3)
<type 'exceptions.OSError'>: [Errno 2] No such file or directory: '/root/amber16'
Molecular dynamics • 1.5k views
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If you do not have the AmberTools package installed, you should download it at http://ambermd.org/AmberTools16-get.html before proceeding with the installation. Locate the downloaded compressed file using the "Browse..." button (2).

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Please provide your command line and what you've tried so far

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I installed only Tkinter and Pmw2.0.1 in python (which works fine), followed by installation.

root@andrea-Lenovo-G580:/home/andrea/Downloads# ./LiGRO_Install.py

Software screen pops up to load AmberTools16.tar file , it runs and shows the errors

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Please use the "Add reply" button to reply to a comment.

Did you specify /root/amber16 at some point during the installation? The error pertains to it not existing.

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No, i am not able to load files using /root

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