Question

Where can I download a txt file including all human snps rsids, chromosome, and locations?

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5.9 years ago

Huichen03 ▴ 20

I tried to download data from useast.ensemble.org, while the downloaded file only contains SNPs in chromosome 1. Is there a better way to do that?

Thank you in advance!

SNP R gene • 2.9k views

ADD COMMENT • link updated 2.7 years ago by GenoMax 141k • written 5.9 years ago by Huichen03 ▴ 20

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If your title is longer than the content of your post you may want to rewrite it.

ADD REPLY • link 5.9 years ago by WouterDeCoster 47k

GenoMax · Accepted Answer · 2018-05-17

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5.9 years ago

Pierre Lindenbaum 161k

ADD COMMENT • link updated 2.7 years ago by GenoMax 141k • written 5.9 years ago by Pierre Lindenbaum 161k

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The link is dead.

ADD REPLY • link 2.7 years ago by farshad.madani • 0

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Since most browsers are not allowing FTP links, original link has been changed to https. It will work now.

ADD REPLY • link 2.7 years ago by GenoMax 141k

score 2 · Accepted Answer · 2018-05-17

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5.9 years ago

GenoMax 141k

Ensembl's version at this link: https://ftp.ensembl.org/pub/release-92/variation/vcf/homo_sapiens/ They are split according to populations and also for 1000 genomes.

ADD COMMENT • link 2.7 years ago by GenoMax 141k