Question: Read group information
0
gravatar for misterie
2.3 years ago by
misterie90
misterie90 wrote:

Hi,

I have aligned my files from many lines and I forgot to put information about a Read Group (RG). I know, that Picard MergeSamFiles is requiring that information in bam files. I have used a BWA software for alignment and I didn't use a -R option.

I have found a program called AddOrReplaceReadGroups from Picard package. Can I use it normally after alignemnt for adding information about RG?

Thank you in advance.

bwa read group picard gatk • 685 views
ADD COMMENTlink modified 2.3 years ago by WouterDeCoster44k • written 2.3 years ago by misterie90

READ GROUP INFORMATION

There is no need to SHOUT. I have adapted your title.

ADD REPLYlink written 2.3 years ago by WouterDeCoster44k
0
gravatar for Pierre Lindenbaum
2.3 years ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum131k wrote:

Can I use it normally after alignemnt for adding information about RG?

yes

ADD COMMENTlink written 2.3 years ago by Pierre Lindenbaum131k
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