In blasp their is %identity? how to find similarity percentage in blastP ??
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2.8 years ago

In blasp their is %identity? how to find similarity percentage in blastP ??

sequencing Tool • 1.9k views
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Hello gangadharivinaykumar,

You've not phrased the question properly. Please write a more meaningful question or this post will be closed. Remove additional ?symbols as that do not add anything to the question.

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This would be in the ppos (percentage positive matches) field (raw number of positive scoring matches, i.e. "protein similarity" is in positives.)

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I also want to find '%identity'

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That would be pident.

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9 weeks ago

I didn't find ppos directly in the report. I click the sequence alignments that I am interested in, and click "alignment" column, and find the positivities, as well as identities.

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