Hi, I installed the sratoolkit from NCBI by following. While running prefetch, the following error generated. I assume something wrong with my path. How can I solve it?
export PATH="/Network/Servers/biocldap.otago.ac.nz/Volumes/userdata/student_users/saadleeshehreen/miniconda3/bin:$PATH" conda install -c daler sratoolkit -bash-4.2$ which prefetch ~/miniconda3/bin/prefetch -bash-4.2$ prefetch https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR7768518 Maximum file size download limit is 20,971,520KB 2018-09-05T10:36:57 prefetch.2.5.7 int: path incorrect while resolving tree within virtual file system module - https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR7768518: VResolverLocal
As conda version didn't work, I tried different approach. I am a Mac user. So, downloaded the sratoolkit.2.9.2-mac64 and installed it locally. I got the following errors:
~/sratoolkit.2.9.2-mac64/bin/prefetch SRR7768518 bash: /Network/Servers/biocldap.otago.ac.nz/Volumes/userdata/student_users/saadleeshehreen/sratoolkit.2.9.2-mac64/bin/prefetch: cannot execute binary file
Any solution to solve it?
Thanks in advance.