Question: find major transcript from a specific tissue
1
gravatar for sacha
7 months ago by
sacha1.7k
France
sacha1.7k wrote:

Hi,

How can I know which transcript is majoritary used for a specific tissue ? For exemple, I would like to known for CDH1 gene, which transcript is majoritary expressed in stomach .
Any database ?

rna-seq database • 313 views
ADD COMMENTlink modified 7 months ago by kristoffer.vittingseerup1.8k • written 7 months ago by sacha1.7k

Answer for this may still be undetermined. If you look to the right under "Similar Posts" this question has come up several times in past. You could look through some of the possibilities there, while you wait for answers here.

ADD REPLYlink modified 7 months ago • written 7 months ago by genomax67k

Indeed, the data may simply not exist ... yet. If it is not on Human Protein Atlas, then I am not sure where to look.

ADD REPLYlink written 7 months ago by Kevin Blighe42k
1
gravatar for kristoffer.vittingseerup
7 months ago by
European Union
kristoffer.vittingseerup1.8k wrote:

Take a look at the GTEx transcript browser

ADD COMMENTlink written 7 months ago by kristoffer.vittingseerup1.8k

Never knew that it existed. Thanks!

ADD REPLYlink written 7 months ago by Kevin Blighe42k
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