find major transcript from a specific tissue
1
2
Entering edit mode
6.0 years ago
sacha ★ 2.4k

Hi,

How can I know which transcript is majoritary used for a specific tissue ? For exemple, I would like to known for CDH1 gene, which transcript is majoritary expressed in stomach .
Any database ?

RNA-Seq database • 1.4k views
ADD COMMENT
0
Entering edit mode

Answer for this may still be undetermined. If you look to the right under "Similar Posts" this question has come up several times in past. You could look through some of the possibilities there, while you wait for answers here.

ADD REPLY
0
Entering edit mode

Indeed, the data may simply not exist ... yet. If it is not on Human Protein Atlas, then I am not sure where to look.

ADD REPLY
3
Entering edit mode
6.0 years ago

Take a look at the GTEx transcript browser

ADD COMMENT
0
Entering edit mode

Never knew that it existed. Thanks!

ADD REPLY

Login before adding your answer.

Traffic: 1816 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6