I have been looking for a program or tool for genome alignment (in my case phages). I have an assembled phage and multiple genomes from BLAST hit; I annotated the genes in these phages using DNAMaster, and now, I want to align these genomes against each other and have been looking for a program with which I can view the alignment and the annotated genes something similar to this below image, where the genes are presented in a block or something that is visually distinguishable. The alignment will be used for comparative analysis to look for genes of interest among the genomes including the assembled phage.
I was using Mauve from Darling lab but it does not give result like what I am looking for; however, if you know of a way to get a presentation like this for genome alignment, please suggest me. Please let me know if something is not clear.