Question: the best and user-friendly tools for blast peptides
0
gravatar for alirezaei3333
25 days ago by
alirezaei33330 wrote:

I have many cysteine-rich peptides. I aim to blast them. I need a program and online tools to blast. Which tools and programs are suggested?

sequencing protein alignment • 113 views
ADD COMMENTlink modified 25 days ago by ATpoint15k • written 25 days ago by alirezaei33330
1

You can't/don't want to use blast+? Or do you think the repeats are going to be masked by blast? They should not be at NCBI web blast by default.

ADD REPLYlink modified 25 days ago • written 25 days ago by genomax65k

i dont familiar with any blast. its the first time which i should use this tools. can you guide me accurate and easy?

ADD REPLYlink written 25 days ago by alirezaei33330

Visit NCBI Web Blast page. Follow the prompts (those should be easy enough to understand). If you need help check this page.

ADD REPLYlink modified 25 days ago • written 25 days ago by genomax65k

Paste all your sequences in to the BLASTP webpage. Hit submit. It doesn't get any easier than that. If you have some specific questions, come back to us.

ADD REPLYlink written 25 days ago by jrj.healey11k

its not possible because of big data

ADD REPLYlink written 24 days ago by alirezaei33330

You need a local install in that case.

ADD REPLYlink written 24 days ago by jrj.healey11k
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