I have a ped file for 50 samples. Also, I have map file for the same. How to make use of ped and map files to generate bed, bim and fam files ?
I tried running using plink,
./plink_1.9_linux_160914 --file input_files/50_samples.ped --make-bed --out 50_samples_try --noweb PLINK v1.90b2i 64-bit (8 Sep 2014) https://www.cog-genomics.org/plink2 (C) 2005-2014 Shaun Purcell, Christopher Chang GNU General Public License v3 Logging to 50_samples_try.log. Note: --noweb has no effect since no web check is implemented yet. 15741 MB RAM detected; reserving 7870 MB for main workspace. Error: Failed to open input_files/50_samples.ped.map. (--file expects a filename *prefix*; '.ped' and '.map' are automatically appended.)