Question: Gene expression profile analysis
0
gravatar for mxlsherry1992
17 months ago by
mxlsherry199230 wrote:

Dear all, I want to draw a graph like the attached picture, the axis is the several timepoint used for RNA sequencing, I want to draw all the genes expression profile cluster to find the genes that have same expression profile. Could you please tell me which software can help realize that? Thank you!: 😊

graph

ADD COMMENTlink modified 17 months ago by Ron1000 • written 17 months ago by mxlsherry199230
3
gravatar for Prakash
17 months ago by
Prakash1.9k
India
Prakash1.9k wrote:

There is another tool called short-time series expression miner

ADD COMMENTlink written 17 months ago by Prakash1.9k
2
gravatar for Woa
17 months ago by
Woa2.8k
United States
Woa2.8k wrote:

MFUZZ

MFUZZ: Soft clustering of time series gene expression data

ADD COMMENTlink modified 17 months ago • written 17 months ago by Woa2.8k
1
gravatar for Ron
17 months ago by
Ron1000
United States
Ron1000 wrote:

Also EBseq. http://bioconductor.org/packages/release/bioc/html/EBSeq.html It provides different possible patterns between multiple conditions.

ADD COMMENTlink written 17 months ago by Ron1000
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