Question: Gene expression profile analysis
0
gravatar for mxlsherry1992
22 months ago by
mxlsherry199240 wrote:

Dear all, I want to draw a graph like the attached picture, the axis is the several timepoint used for RNA sequencing, I want to draw all the genes expression profile cluster to find the genes that have same expression profile. Could you please tell me which software can help realize that? Thank you!: 😊

graph

ADD COMMENTlink modified 22 months ago by Ron1.0k • written 22 months ago by mxlsherry199240
3
gravatar for Prakash
22 months ago by
Prakash2.1k
India
Prakash2.1k wrote:

There is another tool called short-time series expression miner

ADD COMMENTlink written 22 months ago by Prakash2.1k
2
gravatar for Woa
22 months ago by
Woa2.8k
United States
Woa2.8k wrote:

MFUZZ

MFUZZ: Soft clustering of time series gene expression data

ADD COMMENTlink modified 22 months ago • written 22 months ago by Woa2.8k
1
gravatar for Ron
22 months ago by
Ron1.0k
United States
Ron1.0k wrote:

Also EBseq. http://bioconductor.org/packages/release/bioc/html/EBSeq.html It provides different possible patterns between multiple conditions.

ADD COMMENTlink written 22 months ago by Ron1.0k
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