Question: DEXSeq output from Galaxy
gravatar for anand.gururajan
12 months ago by
anand.gururajan0 wrote:

Hi everyone. I'm new to using DEXSeq on Galaxy and had a question about the format of the output. From the description on the Galaxy tool, the format of the results file has 14 standard column headings plus unlabelled columns for the samples being compared. Exon usage level coefficients are reported with Factor 2 (reference factor, e.g control) first then Factor 1 (primary factor, e.g. treatment). I'm curious as to what order the sample columns are organised. Factor 1 first (primary factor, e.g treatment) or Factor 2 first (reference factor, e.g control)? Thanks.

galaxy dexseq • 283 views
ADD COMMENTlink modified 12 months ago by WouterDeCoster44k • written 12 months ago by anand.gururajan0

You may want to post this over at Galaxy help site:

ADD REPLYlink written 12 months ago by genomax91k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2300 users visited in the last hour