Question: Error in pypeliner
0
gravatar for nilesh.gardi2688
29 days ago by
nilesh.gardi26880 wrote:

I unable to proceed

library(survival)
data<-read.table("KM_plot_input.txt",header=T,row.names=1)
x<-survfit(Surv(data[,2],data[,3])~data[,1])
survdiff(Surv(data[,2],data[,3])~data[,1])

This returns: raise PipelineException('pipeline failed') pypeliner.scheduler.PipelineException: pipeline failed

sequencing • 86 views
ADD COMMENTlink modified 29 days ago by Devon Ryan93k • written 29 days ago by nilesh.gardi26880

I think you need to ask on stackoverflow (today I've learnt)

ADD REPLYlink written 29 days ago by German.M.Demidov1.0k

What does your R code have to do with a python program?

ADD REPLYlink written 29 days ago by Devon Ryan93k

Do you run that R codes via command line (or RStudio) or is this wrapped into some kind of pipeline / workflow manager?

ADD REPLYlink modified 28 days ago • written 28 days ago by ATpoint26k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1012 users visited in the last hour