Question: CNV analysis from WGBS data
1
gravatar for Deepak Tanwar
5 months ago by
Deepak Tanwar4.0k
ETH Zürich, Switzerland
Deepak Tanwar4.0k wrote:

Hello!

Which tools can I use for CNV analysis from WGBS data?

Can I use tools like CNVkit or CNVnator, followed by CNVRanger?

cnv wgbs R • 218 views
ADD COMMENTlink modified 5 months ago by ATpoint36k • written 5 months ago by Deepak Tanwar4.0k
1
gravatar for ATpoint
5 months ago by
ATpoint36k
Germany
ATpoint36k wrote:

WGBS is basically normal WGS, but with generally lower quality due to the bisulfite conversion. You can therefore any of the numerous CNV tools available.

ADD COMMENTlink written 5 months ago by ATpoint36k
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