Question: CNV analysis from WGBS data
1
gravatar for Deepak Tanwar
13 days ago by
Deepak Tanwar4.0k
ETH Zürich, Switzerland
Deepak Tanwar4.0k wrote:

Hello!

Which tools can I use for CNV analysis from WGBS data?

Can I use tools like CNVkit or CNVnator, followed by CNVRanger?

cnv wgbs R • 82 views
ADD COMMENTlink modified 13 days ago by ATpoint29k • written 13 days ago by Deepak Tanwar4.0k
1
gravatar for ATpoint
13 days ago by
ATpoint29k
Germany
ATpoint29k wrote:

WGBS is basically normal WGS, but with generally lower quality due to the bisulfite conversion. You can therefore any of the numerous CNV tools available.

ADD COMMENTlink written 13 days ago by ATpoint29k
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