Job:Graph Genome R&D Engineer at Seven Bridges, US or UK
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19 months ago
amit.jain ▴ 10

Seven Bridges aims to transform healthcare by developing innovative technologies to address the challenges in representing and understanding the diversity of the human genome and the changes that lead to disease. We have described and implemented the Genome Graph paradigm to robustly, accurately and quickly recover the human genome from sequencing data, and to highlight significant mutations.

Our team is looking for bioinformatics programmers to further develop this software implementation, comprised of novel data structures and advanced computational procedures. Expert knowledge of C++ and numerical algorithms is essential, and a working knowledge of Python would be beneficial.

We have offices in London (UK), and Boston (USA). Remote working would be acceptable.

See the complete role specification on our website.

Job genome graph bioinformatics C++ • 603 views
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Hello, I use graph genome after fastq quality control, but something wrong with it: ~~~ 2020-03-14 13:49:03.052 ( 276.555s) [main thread ] global_search.hpp:145 0| } 0.000 s: Initialising execution context 0 for ggeco paired-end search terminate called after throwing an instance of 'asd::CError'

Loguru caught a signal: SIGABRT Stack trace: 12 0x40db77 /usr/local/bin/aligner() [0x40db77] 11 0x7fdaa69a9f45 __libc_start_main + 245 10 0x40c023 /usr/local/bin/aligner() [0x40c023] 9 0x48a89d /usr/local/bin/aligner() [0x48a89d] 8 0x47d622 /usr/local/bin/aligner() [0x47d622] 7 0x43ec89 /usr/local/bin/aligner() [0x43ec89] 6 0x7fdaa72d4463 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a463) [0x7fdaa72d4463] 5 0x7fdaa72d4221 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a221) [0x7fdaa72d4221] 4 0x7fdaa72d41d6 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a1d6) [0x7fdaa72d41d6] 3 0x7fdaa72d63e5 __gnu_cxx::__verbose_terminate_handler() + 293 2 0x7fdaa69c2028 abort + 328 1 0x7fdaa69bec37 gsignal + 55 0 0x7fdaa7ddc330 /lib/x86_64-linux-gnu/libpthread.so.0(+0x10330) [0x7fdaa7ddc330] 2020-03-14 13:49:07.899 ( 281.401s) [main thread ] :0 FATL| Signal: SIGABRT

Loguru caught a signal: SIGSEGV Stack trace: 11 0x40db77 /usr/local/bin/aligner() [0x40db77] 10 0x7fdaa69a9f45 __libc_start_main + 245 9 0x40c023 /usr/local/bin/aligner() [0x40c023] 8 0x48a89d /usr/local/bin/aligner() [0x48a89d] 7 0x47d622 /usr/local/bin/aligner() [0x47d622] 6 0x43ec89 /usr/local/bin/aligner() [0x43ec89] 5 0x7fdaa72d4463 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a463) [0x7fdaa72d4463] 4 0x7fdaa72d4221 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a221) [0x7fdaa72d4221] 3 0x7fdaa72d41d6 /usr/lib/x86_64-linux-gnu/libstdc++.so.6(+0x6a1d6) [0x7fdaa72d41d6] 2 0x7fdaa72d63e5 __gnu_cxx::__verbose_terminate_handler() + 293 1 0x7fdaa69c2177 abort + 663 0 0x7fdaa7ddc330 /lib/x86_64-linux-gnu/libpthread.so.0(+0x10330) [0x7fdaa7ddc330] 2020-03-14 13:49:07.900 ( 281.402s) [main thread ] :0 FATL| Signal: SIGSEGV ~~~ Can you tell me how to solve it ?

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