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3.1 years ago
BDK_compbio ▴ 130

I want to collect all isoforms of all genes (Fasta/Fastq file of nucleotide and protein sequences) of Arabidopsis. I am wondering if there is a straightforward way to download the file from any database.

isoform sequence • 714 views
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What have you tried?

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I downloaded the pep.fasta and cdna.fasta from here. For some other organisms, I am getting sequences from Uniport->Components->Downloads->FASTA format(canonical and isoform). Am I doing it right?

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How about getting them from NCBI?

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Thanks !! I tried to download from TAIR and Uniport database (as replied to an earlier comment). I hope I am on right track.