Question: Finding enhancers of the whole human body
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gravatar for elisheva
4 months ago by
elisheva100
Israel
elisheva100 wrote:

HI!
I am looking for enhancer bed files of the whole human body.
I found at Fantom5 available data, but I am not sure how they define it and if they can be trusted.
The Enhancers Atlas has data for a specific cell line or tissue and I guess that downloading all the data and combine it afterward will be a big mess.
I also would like to find a list of consensus enhancers in all cell types and tissues - is this kind of data available?

Thanks

cage-seq enhancers fantom5 • 113 views
ADD COMMENTlink written 4 months ago by elisheva100

Check the methods section of FANTOM5 article.

https://www.nature.com/articles/nature12787

ADD REPLYlink written 4 months ago by Arup Ghosh2.7k

Are you sure that makes biological sense? After all, a lot of regulation is tissue-specific.

ADD REPLYlink written 4 months ago by WouterDeCoster44k
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