Entering edit mode
2.2 years ago
Juke34
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7.2k
how to split a fasta file?
This is a recurring question and many answers can be found among many threads in biostars.
I made a mini-review and listed tools best suited for that purpose here: https://github.com/NBISweden/GAAS/blob/master/annotation/knowledge/split_fasta.md
Hoping it can help to choose the appropriate tool depending the task or the coding language wished.
Nice tutorial. We have developed SEDA, a tool for processing FASTA files, and it has two functions for file splitting: Split (https://www.sing-group.org/seda/manual/operations.html#split), and Regular expression split (https://www.sing-group.org/seda/manual/operations.html#regular-expression-split). Would you consider adding it to the repository?
Yes sounds good . Is it GUI only?
Yes, it is GUI only.