PROVEAN not working
I'm having troubles making PROVEAN work.
I’m getting this error while trying to run PROVEAN
[17:44:08] searching related sequences...
[18:45:32] clustering subject sequences...
./provean.sh: line 187: 41879 Segmentation fault
Any idea what I'm doing wrong?
I ended up using PROVEAN web interface.
It seems that this segmentation fault is a common problem. I've tried using a big memory machine (500GB) but the error was still appearing. Similarly, I've tried installation via conda as well. I ended up with the same error
The blast+ v2.4.0 and nr database version4 from
It seems that provean does not compatible with the latest blast database (version 5).
The configuration in my provean.sh is:
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