Question: How do I analyze MGMT methylation status from EPIC array data?
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gravatar for kwanghoon
3 months ago by
kwanghoon10
kwanghoon10 wrote:

Hi, I have data generated by using EPIC array(850k)

I'm trying to check MGMT methylation status from these brain tumor data.

I tried to download R package "mgmtstp27" but installation kept failed. (Some papers used this package, so I also tried)

https://github.com/badozor/mgmtstp27


install.packages("mgmtstp27_0.6-2.zip",repos=NULL)

Result was

https://cran.rstudio.com/bin/windows/Rtools/

Installing package into ‘C:/Users/lexim/Documents/R/win-library/4.0’

(as ‘lib’ is unspecified)

Error in install.packages : zip file ‘mgmtstp27_0.6-2.zip’ not found


Can I get help with this..?

ADD COMMENTlink modified 3 months ago • written 3 months ago by kwanghoon10
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