Question: ROSE Algorithm for Ranking Super Enhancers
0
gravatar for aropri
5 weeks ago by
aropri0
aropri0 wrote:

I am trying to run ROSE after I have gotten my peak files and converted them to gff. I tried to use ROSE and it seemed ROSE_main.py failed to call ROSE_bamToGFF.py, with the following message: "sh: ROSE_bamToGFF.py: command not found" I called ROSE_main.py in the same folder that does contain ROSE_bamToGFF.py and I do not understand why this error occurred. BTW, I was able to call ROSE_bamToGFF.py by "python ROSE_bamToGFF.py". Any help is appreciated.

chip-seq • 91 views
ADD COMMENTlink written 5 weeks ago by aropri0

The folder is not in PATH. https://opensource.com/article/17/6/set-path-linux

ADD REPLYlink written 5 weeks ago by ATpoint36k
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