Question: Converting VCF files into bcftools style region co-ordinates
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gravatar for Negin
5 weeks ago by
Negin0
Negin0 wrote:

Hi, I was wondering if there is any tool that converts the VCF files into bcftools style region co-ordinates. By region, I mean the regions which are representing genes. Here, it is an example:

CDS1 gene-id 1:1000-1040 CDS2 gene-id 2:1200-1250

I would appreciate it if someone help me with this, please.

ADD COMMENTlink modified 5 weeks ago • written 5 weeks ago by Negin0

what is " bcftools style region co-ordinates." ?

ADD REPLYlink written 5 weeks ago by Pierre Lindenbaum131k

I have edited my question and provided an example there.

ADD REPLYlink written 5 weeks ago by Negin0

I do not understand

ADD REPLYlink written 5 weeks ago by Pierre Lindenbaum131k
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