Is there any method to compare t-SNE plot drawn by same samples and different standard?
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8 months ago
kwanghoon ▴ 20

Hi, I'm dealing with Methylation array data.

I made two t-SNE plots using 10000 probes beta value and 757 probes beta value.

and they look like very similar I think.

757 https://ibb.co/LDwZCQD

10000 https://ibb.co/BLwJMNt

So, I'm trying to vaildate they are similar by statistical value.

Is there any method to validate these plot..?

EPIC t-sne Methylation array Methylation • 393 views
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