Creating Mappability File

Question

[Arturo_M]

Hello, I am trying to create a Mappability File using the executables and instructions that are part of peakseq that are here http://archive.gersteinlab.org/proj/...lity_Map/Code/
Once all files were produced using python compile.py, what are the files that CountMap.py takes as input... I tried all the different ones for a chromosome but I get this " SyntaxError: Non-ASCII character '\xac' " Do I need to process this files before using CountMap.py? And if thats the case which program should I use?

Thank you all

Answer 1

[Istvan Albert]

See the answers to Finding Mappability with Peakseq