Hi! Biostar readers
This is my first post to Biostar,
I have a VCF file containing variants, i want to convert to PLINK PED format.
I have tried using, vcftools --vcf *.vcf --plink
But when i input this file into WGAViewer it says "SNP and p value cannot be the same", Why?
Is there any other software to convert vcf to plink ped format?