Just for reference, what i did based on liangkaiye's suggestion was to install homebrew and install the following formula
brew install --enable-cxx --enable-fortran https://raw.github.com/Homebrew/homebrew-dupes/master/gcc.rb
after this, I defined the $(CXX) in the src/Makefile for g++-4.7 and it worked. Hope this helps someone.
Pindel is developed under Mac OS. so sure you can compile it as well for os x.
you just need to get the source code, go to trunk folder and then type ./INSTALL <path to=""/>
Let me know if you have any questions.
I also experienced the same problem when I upgraded my mac system. I simply removed xcode and installed a standalone g++, everything works fine.
Malachi, you can visit me at TGI if you have any question about Pindel. my email is kye@genome.
Just installed the pindel. It took a long time to figure out the issues.
See this link for the process of installment: https://ngsguangxujin.blogspot.com/2017/08/compile-pindel-in-macos.html