Problem With Autodock 4.2.5
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10.1 years ago

Dear all,

Actually I need to go through docking simulation for my study. I'm trying using autodock 4.2.5. I already successful until stage autogrid to save DPF file. Ok. After I'm trying to run autogrid, I'm trying to click button "Run autogrid". Nothing happens and I'm get this message.

C:/ Program' is not recognized as an internal or external command, operable program or batch file.
Traceback (most recent call last):
File "C:\Autodock\MGLToolsPckgs\ViewerFramework\VF.py", line 898, in tryto
result = command( *args, **kw )
File "C:\Autodock\MGLToolsPckgs\AutoDockTools\autostartCommands.py", line 898, in doit
cmd = ("cd \"%s\" && "+cmd ) % wd
TypeError: cannot concatenate 'str' and 'list' objects
Exception in Tkinter callback
Traceback (most recent call last):
File "C:\Autodock\lib\lib-tk\Tkinter.py", line 1403, in __call__
return self.func(*args)
File "C:\Autodock\lib\lib-tk\Tkinter.py", line 498, in callit
func(*args)
File "C:\Autodock\MGLToolsPckgs\AutoDockTools\autostartCommands.py", line 958, in saveLog
if self.WinCmd.ok.configure()['state'][-1] == 'normal':
AttributeError: AutoGridStarter instance has no attribute 'WinCmd'

I'm being stuck in this stage almost 1 month. I hope someone can help me solve this problem. Because this is for my master project and I would like to publish a paper as soon as possible. I would appreciate if someone can help me. I can pay for money if you want. This is my email naimhairul@gmail.com.

Thanks a million

docking • 6.8k views
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Check your installation. It seems an installation problem with the paths..

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Check the path to your default directory (File->Preferences). Make your current directory as your default directory. Just on a safe side, Put all your .exe files / input files / executed files in one folder to avoid any confusion or to generate any error. Hopefully, it will help.

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Use ubuntu/linux. Simply install autodock and autogrid by sudo apt-get install autodock

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Hi!

I have a problem with Autodock 4.2 exactly I have problem with run autogrid and run autodock where autogrid and autodock processes (calculation) not execute successfully. ERROR: can't find or open receptorPDBQT file "hsg1.pdbqt" and ERROR: Unsuccessful completion

As for run autodock

error : insufficient grid points
aborting

Please help me because I'm a beginner

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