Question: Raw Data From Solid Sequencing
0
gravatar for Assa Yeroslaviz
4.8 years ago by
Assa Yeroslaviz1.1k
Munich
Assa Yeroslaviz1.1k wrote:

Hi,

does anyone know where I can find a downloadable data set of Solid seqeuncing?

There is a lot of Illumina NGS data on the net, but I can't find any SOLID data.

Thanks

solid • 1.8k views
ADD COMMENTlink modified 4.2 years ago by polarise370 • written 4.8 years ago by Assa Yeroslaviz1.1k
1
gravatar for Devon Ryan
4.8 years ago by
Devon Ryan86k
Freiburg, Germany
Devon Ryan86k wrote:

There's quite a bit available in the SRA.

ADD COMMENTlink modified 4.8 years ago • written 4.8 years ago by Devon Ryan86k
0
gravatar for polarise
4.2 years ago by
polarise370
Galway, Ireland
polarise370 wrote:

Even though the data is available as Illumina NGS I think the SRA Toolkit can allow you to convert to SOLID colourspace format. The command to use is

    abi-dump

with more details at http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=toolkit_doc

Best,

P

ADD COMMENTlink written 4.2 years ago by polarise370
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