Looking for COVID-19 patient sample FastQ/VCF files
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3.0 years ago
screadore ▴ 20

Hello,

Does anyone know of any publicly available COVID-19 FastQ/VCF data?

WGS COVID-19 VCF WES Sequencing • 888 views
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but why?...

what exactly do you need - genome DNA reads from a human who had COVID or a sequence of the virus itself?

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In any case, raw fastq files from patients are always access-restricted, e.g. at GISAID, dbGAP or ENA/EBI, so you or rather your PI would need to request access. VCF files might be easier/faster to get.

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