Hi all, I want to run the ATAC-seq pipeline given on the ENCODE github page
I have installed the pipeline using conda on centos 7 and made the input json file. But I am not able to understand that what to do after that.
I have seen a blog "https://bioinfocore.com/blogs/encode-atac-seq-analyzing-pipeline-hands-on-tutorial/" that has explained the steps required to run the pipeline but it is after installing slurm.
Can anyone help me to run the pipeline?
Thanks in advance