NGS reads calculation
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22 months ago
anasjamshed ▴ 120

I have paired-end reads data of NGS in 2 fastq files that are: father_R1.fq.gz and father_R2.fq.gz

How can I find how many reads are included in these two fastq files and their read length respectively through Galaxy?

Is there any specific tool for it?

Galaxy • 876 views
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How can I find how many reads are included in these two fastq files and their read length respectively through Galaxy?

what did you find so far ?

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I tried FASTQ info in galaxy

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Ask Galaxy specific questions on their help forum for prompt response: https://help.galaxyproject.org/

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I am asking about specific tool

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FastQC will give you those data, along with a lot of other useful quality control info https://galaxy-au-training.github.io/tutorials/modules/fastqc/

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